Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887726.1_cds_XP_016442221.1_37507
CDS Infomation

[gene=LOC107767658] [db_xref=GeneID:107767658] [protein=probable protein phosphatase 2C 27] [protein_id=XP_016442221.1] [location=complement(join(251631..252189,252744..252949,253922..254116,255129..255335))] [gbkey=CDS]
Sequence

ATGCATATGGCTGCGGGCACTGATTTTTCACCGCCATTTGGTATATTAGAAGAGGGCTAC
AGTAGTCAGGAGAATACATCTTCTGCAAAAGATGAATTGCGAGAGGGATCAGGCGAGCTA
AAGCAGACAATTGGTAAACCACCAAGGCACCTATCTGTCGGACGACATTCATTAGGCTCT
GTTGCATTTGTAGCAGCGACGGATTTGGATCTTGAAATCGGAGTGAAAGTTTCACTGTAC
CCTTCAGAAGAGAACTCAAATTTTTTGCCAGTATTCCGTTCTGGAAGTTGTGCTGAGAAA
GGACCCAAACAGTACATGGAGGATGAACACATCTGTATGGATGATCTACTCAATCATGTT
GGTGACATGACAGGTCTAACTTCACCAGGGGCGTTCTATGGGGTATTTGATGGCCATGGG
GGTACAGATGCAGCACTATTTGTTAGGAATAACATTCTCAAGTTCATACTTGAGGACTCC
TGTTTTCCCCTGTGTTTGGAGAGGGCACTCAAGAATGCTTTTCTGAAAGCGGACTATGCC
TTTGCTGATGATAGTTCCCTCGACATATCCTCTGGCACTACAGCACTGACAGCTCTAATG
TTTGGAAGAACCATGATGGTTGCTAATGCAGGTGATTGTCGCGCGGTGCTGGGGAAACGA
GGTAAAGCAATTGAGCTGTCCAAGGACCACAAACCAAATAGCACGTCTGAAAGACTTAGA
ATAGAAAAACTTGGAGGAATCATATATGATGGATACTTAAATGGACAGTTATCTATAGCA
CGTGCGTTGGGAGATTGGCACATGAAGGGCCCAAAAGGATCTGCCTGCCCATTGAGTGCA
GAACCAGAGTTGCAGGAAACGTTGTTGACGGAGGATGATGAGTTCCTTATCATGGGTTGT
GATGGTCTTTGGGATGTTATGAGTAGCCAATGTGCCGTTACACTGGCCAGGAAAGAACTG
ATGCTGCATAATGATCCTGAAAGATGTTCAAGAGAATTGGTCAGGGAAGCCCTCAAGCGC
AACACATGCGACAATTTAACAGTAATCGTGATTTGCTTCTCTCCAGATCCTCCACCTCGG
ATAGAAGTTCCTCAGACTCGAGTTCGTAGAAGCATATCAGCAGAAGGACTGAATCTTCTA
AAAGGAGTACTGGAAAGCAACTCATGA

Peptide Sequence

PEP ID

XP_016442221.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 27 [Nicotiana tabacum]
Sequence

MHMAAGTDFSPPFGILEEGYSSQENTSSAKDELREGSGELKQTIGKPPRHLSVGRHSLGS
VAFVAATDLDLEIGVKVSLYPSEENSNFLPVFRSGSCAEKGPKQYMEDEHICMDDLLNHV
GDMTGLTSPGAFYGVFDGHGGTDAALFVRNNILKFILEDSCFPLCLERALKNAFLKADYA
FADDSSLDISSGTTALTALMFGRTMMVANAGDCRAVLGKRGKAIELSKDHKPNSTSERLR
IEKLGGIIYDGYLNGQLSIARALGDWHMKGPKGSACPLSAEPELQETLLTEDDEFLIMGC
DGLWDVMSSQCAVTLARKELMLHNDPERCSRELVREALKRNTCDNLTVIVICFSPDPPPR
IEVPQTRVRRSISAEGLNLLKGVLESNS

Transcript Sequence

Gene sequence data has not been registered.